DU Dijon
Quality control of NGS data
| Instructor | Stephanie Le Gras |
|---|---|
| Duration | 3.5 hours |
| Content | Quality control of raw sequencing data, data cleaning, FASTQ file handling (lecture) |
| Practical session on QC of NGS data (Hands-on) | |
| Prerequisites | None |
Alignement de séquences, manipulation, contrôle-qualité et analyse de fichiers SAM/BAM
| Instructor | Stephanie Le Gras |
|---|---|
| Duration | 3.5 hours |
| Content | Read mapping, handling, QC and analysis of SAM/BAM files (lecture) |
| Practical session on mapping of DNA-seq data (Hands-on) | |
| Prerequisites | None |
Introduction to Galaxy
| Instructor | Stephanie Le Gras |
|---|---|
| Duration | 3.5 hours |
| Content | Description of the key features of Galaxy (Lecture) |
| Practical session on Galaxy usage (Hands-on) | |
| Prerequisites | None |
Introduction à Ensembl/Biomart
| Instructor | Stephanie Le Gras, Jean Muller |
|---|---|
| Duration | 3.5 hours |
| Content | Introduction to Ensembl Genome Browsers/Biomart (Lecture) |
| Introduction to Ensembl Genome Browsers/Biomart (Hands-on) | |
| Prerequisites | None |
