Differences
This shows you the differences between two versions of the page.
Both sides previous revision Previous revision Next revision | Previous revision | ||
training:ngstraining [2023/04/21 10:13] slegras [2 Introduction to Galaxy] |
training:ngstraining [2023/05/16 16:07] (current) keime [Introduction to Next Generation Sequencing data analysis] |
||
---|---|---|---|
Line 1: | Line 1: | ||
- | ====== Introduction to Next Generation Sequencing data analysis ====== | + | ====== Introduction to RNA-seq and ChIP-seq data analysis ====== |
===== 2023, 05/31 and 06/01-02 ===== | ===== 2023, 05/31 and 06/01-02 ===== | ||
Line 12: | Line 12: | ||
^ ::: | {{:training:2305ngsbioinfo_02b_galaxy_correction.pdf|Answers to practical session}} | | ^ ::: | {{:training:2305ngsbioinfo_02b_galaxy_correction.pdf|Answers to practical session}} | | ||
^ ::: | [[https://usegalaxy.fr/join-training/ngstrainingstras23|Register for TiASS]] | | ^ ::: | [[https://usegalaxy.fr/join-training/ngstrainingstras23|Register for TiASS]] | | ||
+ | ^ ::: | [[https://usegalaxy.fr/u/stephanie/h/ngs-data-analysis-training-strasbourg-1|Link to shared history]] | | ||
==== - RNA sequencing : library preparation and experimental design ==== | ==== - RNA sequencing : library preparation and experimental design ==== | ||
^ Instructor ^ [[keime@igbmc.fr|Celine Keime]] ^ | ^ Instructor ^ [[keime@igbmc.fr|Celine Keime]] ^ | ||
Line 51: | Line 51: | ||
==== - Analysis of ChIP-seq data ==== | ==== - Analysis of ChIP-seq data ==== | ||
^ Instructor ^ [[slegras@igbmc.fr|Stephanie Le Gras]] ^ | ^ Instructor ^ [[slegras@igbmc.fr|Stephanie Le Gras]] ^ | ||
- | ^ Content | {{:training:2305ngsbioinfo_11a_chipseq_dataanalysis_compressed.pdf|Lecture}} | | + | ^ Content | {{:training:2305ngsbioinfo_11a_chipseq_dataanalysis.pdf|Lecture}} | |
^ ::: | {{:training:2305NGSbioinfo_11b_chipseq_dataanalysis_correction.pdf|Answers to practical session}} | | ^ ::: | {{:training:2305NGSbioinfo_11b_chipseq_dataanalysis_correction.pdf|Answers to practical session}} | | ||
==== - NGS analysis automatization: Galaxy workflows ==== | ==== - NGS analysis automatization: Galaxy workflows ==== | ||
^ Instructor ^ [[slegras@igbmc.fr|Stephanie Le Gras]] ^ | ^ Instructor ^ [[slegras@igbmc.fr|Stephanie Le Gras]] ^ | ||
- | ^ Content | {{:training:2305ngsbioinfo_12_workflows_compressed.pdf|Lecture}} | | + | ^ Content | {{:training:2305ngsbioinfo_12_workflows.pdf|Lecture}} | |
==== - Correlation of RNA-seq and ChIP-seq data ==== | ==== - Correlation of RNA-seq and ChIP-seq data ==== |