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Introduction to Next Generation Sequencing data analysis
2023, 05/31 and 06/01-02
14 Illumina Sequencing technology
| Instructor | Celine Keime |
|---|---|
| Content | Lecture |
15 Introduction to Galaxy
| Instructor | Stephanie Le Gras |
|---|---|
| Content | Lecture |
| Answers to practical session | |
| Register for TiASS | |
| Link to shared history |
16 RNA sequencing : library preparation and experimental design
| Instructor | Celine Keime |
|---|---|
| Content | Lecture |
17 Introduction to practical sessions
| Instructor | Celine Keime |
|---|---|
| Content | Lecture |
18 Quality control of Illumina data
| Instructor | Celine Keime |
|---|---|
| Content | Lecture |
19 NGS read mapping
| Instructor | Celine Keime |
|---|---|
| Content | Lecture |
| Answers to practical session |
20 Analysis of RNAseq data
| Instructor | Celine Keime |
|---|---|
| Content | Lecture |
| Answers to practical session |
21 Data mining with Ensembl Biomart
| Instructor | Stephanie Le Gras |
|---|---|
| Content | Lecture |
| Answers to practical session |
22 Functional analysis of RNAseq data
| Instructor | Celine Keime |
|---|---|
| Content | Lecture |
| Answers to practical session |
23 ChIP-sequencing: library preparation and experimental design
| Instructor | Stephanie Le Gras |
|---|---|
| Content | Lecture |
24 Analysis of ChIP-seq data
| Instructor | Stephanie Le Gras |
|---|---|
| Content | Lecture |
| Answers to practical session |
25 NGS analysis automatization: Galaxy workflows
| Instructor | Stephanie Le Gras |
|---|---|
| Content | Lecture |
26 Correlation of RNA-seq and ChIP-seq data
| Instructor | Stephanie Le Gras |
|---|---|
| Content | Lecture |
| Answers to practical session |
